MLOC_69815 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.968296.497725.653396.19046
LEAShoots from the seedlings (10 cm shoot stage)30.913142.049935.111829.9801
INF1Young developing inflorescences (5mm)8.2072810.298.055628.01168
INF2Developing inflorescences (1-1.5 cm)11.247211.704714.165514.1239
ROORoots from the seedlings (10 cm shoot stage)6.987019.6049218.623512.3537
NODDeveloping tillers at six leaf stage, 3rd internode19.871923.115839.877581.1448
CAR5Developing grain, bracts removed (5 DPA)48.148951.19740.19348.6306
CAR15Developing grain, bracts removed (15 DPA)5.479076.81484.6067914.9986



CDS Structure of MLOC_69815






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69815.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369978NoneNoneNoneNone
MLOC_69815.1CUST_5811_PI427708080AvailableAvailablecontig_56994 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g42520.1 -2 1e-111 332 176/212 (83%) 13104.m04200 protein phosphoribosyl transferase, putative, expressed
TAIR PP10 AT1G80050.1 -2 1e-82 256 126/173 (73%) | Symbols: APT2, ATAPT2, PHT1.1 | adenine phosphoribosyl transferase 2 | chr1:30111708-30113261 REVERSE LENGTH=192