- Predicted Gene MLOC_69804
MLOC_69804 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 34.2077 | 40.8431 | 36.0243 | 38.7094 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 29.0948 | 19.9581 | 34.9103 | 23.4651 |
| INF1 | Young developing inflorescences (5mm) | 69.9963 | 72.3681 | 70.2254 | 60.8465 |
| INF2 | Developing inflorescences (1-1.5 cm) | 45.2262 | 58.5197 | 48.5606 | 57.1448 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 18.1998 | 30.5105 | 28.5371 | 33.5917 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.54262 | 7.5992 | 13.0899 | 27.0722 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 47.7936 | 52.5386 | 50.3826 | 49.3418 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 71.9529 | 72.329 | 62.3492 | 167.984 |
CDS Structure of MLOC_69804
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69804.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g04440.1 |
+1 |
0.0 |
1070 |
556/623 (89%) |
13112.m00424 protein 2-isopropylmalate synthase B, putative, expressed |
| TAIR PP10 |
AT1G74040.1 |
+1 |
0.0 |
783 |
394/556 (71%) |
| Symbols: IMS1, MAML-3, IPMS2 | 2-isopropylmalate synthase 1 | chr1:27842258-27845566 FORWARD LENGTH=631 |