- Predicted Gene MLOC_69795
MLOC_69795 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.8498 | 43.0341 | 56.7007 | 41.8478 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.7049 | 1.91842 | 2.29134 | 4.41237 |
| INF1 | Young developing inflorescences (5mm) | 109.538 | 137.975 | 105.4 | 96.741 |
| INF2 | Developing inflorescences (1-1.5 cm) | 201.019 | 174.429 | 159.438 | 192.478 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 548.955 | 342.989 | 257.287 | 377.297 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.978577 | 3.29863 | 0.267676 | 7.91922 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.446992 | 0.147986 | 0.190082 | 0.2424 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.755291 | 0.695497 | 0.597449 | 1.57428 |
CDS Structure of MLOC_69795
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69795.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g25625.1 |
+2 |
0.0 |
630 |
326/394 (83%) |
13109.m18569 protein S-adenosyl-l-methionine decarboxylase leader peptide, putative, expressed |
| TAIR PP10 |
AT3G02470.4 |
+2 |
5e-106 |
330 |
194/358 (54%) |
S-adenosylmethionine decarboxylase | chr3:510223-511323 FORWARD LENGTH=366 |
