MLOC_69777 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.141223.51592.902043.36515
LEAShoots from the seedlings (10 cm shoot stage)10.294810.99076.790836.83121
INF1Young developing inflorescences (5mm)1.613682.214592.034191.73435
INF2Developing inflorescences (1-1.5 cm)0.7915231.19271.958991.44827
ROORoots from the seedlings (10 cm shoot stage)17.187113.08429.875412.9284
NODDeveloping tillers at six leaf stage, 3rd internode63.052155.57762.2115108.96
CAR5Developing grain, bracts removed (5 DPA)13.398514.535116.92515.5998
CAR15Developing grain, bracts removed (15 DPA)6.320428.192993.926916.618



CDS Structure of MLOC_69777






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69777.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370062NoneNoneNoneNone
MLOC_69777.2CUST_18387_PI427708080AvailableAvailablecontig_138414 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g31620.1 -1 4e-78 244 124/144 (86%) 13105.m03246 protein OsCML15 - Calmodulin-related calcium sensor protein, expressed
TAIR PP10 AT1G24620.1 -1 1e-39 142 69/139 (50%) EF hand calcium-binding protein family | chr1:8723893-8724453 REVERSE LENGTH=186