MLOC_69770 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.446482.838273.21542.85679
LEAShoots from the seedlings (10 cm shoot stage)1.573560.05666310.1957320.523311
INF1Young developing inflorescences (5mm)6.313864.558483.24233.74037
INF2Developing inflorescences (1-1.5 cm)5.203445.547794.56595.19603
ROORoots from the seedlings (10 cm shoot stage)0.6448721.973990.7492111.66144
NODDeveloping tillers at six leaf stage, 3rd internode0.02501320.0039099900.0196375
CAR5Developing grain, bracts removed (5 DPA)1.874491.776542.222741.715
CAR15Developing grain, bracts removed (15 DPA)0.1691180.1881960.1635090.378751



CDS Structure of MLOC_69770






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69770.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69770.2CUST_15451_PI427708080AvailableAvailablecontig_56924 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g01008.1 -2 5e-108 339 270/475 (57%) 13103.m12820 protein expressed protein
TAIR PP10 AT2G37960.2 -2 3e-17 86 90/253 (36%) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G54060.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr2:15886962-15889180 REVERSE LENGTH=480