MLOC_69754 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.112470.2511330.2962990.190088
LEAShoots from the seedlings (10 cm shoot stage)0.3276820.1854280.2061470.188418
INF1Young developing inflorescences (5mm)0.4582940.6089490.5950250.403826
INF2Developing inflorescences (1-1.5 cm)1.394320.9063960.8704331.06072
ROORoots from the seedlings (10 cm shoot stage)0.08658940.3093280.3870550.28037
NODDeveloping tillers at six leaf stage, 3rd internode0.1674950.3431680.1540280.840932
CAR5Developing grain, bracts removed (5 DPA)0.4074160.2861830.4204180.313103
CAR15Developing grain, bracts removed (15 DPA)0.6838250.5348040.3867361.1773



CDS Structure of MLOC_69754






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69754.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69754.1CUST_15449_PI427708080AvailableAvailablecontig_56908 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g12760.1 +2 1e-18 92 52/141 (37%) 13105.m01388 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----