MLOC_69748 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.459041.664511.39471.65691
LEAShoots from the seedlings (10 cm shoot stage)0.5042440.4503280.2670040.305144
INF1Young developing inflorescences (5mm)2.110553.414232.400132.20407
INF2Developing inflorescences (1-1.5 cm)6.478187.354795.867677.03849
ROORoots from the seedlings (10 cm shoot stage)0.902991.024791.155540.970897
NODDeveloping tillers at six leaf stage, 3rd internode00.03952260.02765120.130068
CAR5Developing grain, bracts removed (5 DPA)1.225731.331190.8672161.05575
CAR15Developing grain, bracts removed (15 DPA)0.04225570.03357330.04065620.0959235



CDS Structure of MLOC_69748






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69748.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361855NoneNoneNoneNone
MLOC_69748.1CUST_5805_PI427708080AvailableAvailablecontig_56899 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g07030.3 +2 1e-78 260 176/250 (70%) 13102.m12366 protein DUF640 domain containing protein, putative, expressed
TAIR PP10 AT3G23290.2 +2 2e-60 205 114/133 (86%) | Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195