- Predicted Gene MLOC_69748
MLOC_69748 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_69748_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_69748_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.45904 | 1.66451 | 1.3947 | 1.65691 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.504244 | 0.450328 | 0.267004 | 0.305144 |
INF1 | Young developing inflorescences (5mm) | 2.11055 | 3.41423 | 2.40013 | 2.20407 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.47818 | 7.35479 | 5.86767 | 7.03849 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.90299 | 1.02479 | 1.15554 | 0.970897 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0395226 | 0.0276512 | 0.130068 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.22573 | 1.33119 | 0.867216 | 1.05575 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0422557 | 0.0335733 | 0.0406562 | 0.0959235 |
CDS Structure of MLOC_69748
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69748.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g07030.3 |
+2 |
1e-78 |
260 |
176/250 (70%) |
13102.m12366 protein DUF640 domain containing protein, putative, expressed |
TAIR PP10 |
AT3G23290.2 |
+2 |
2e-60 |
205 |
114/133 (86%) |
| Symbols: LSH4 | Protein of unknown function (DUF640) | chr3:8326958-8328010 FORWARD LENGTH=195 |