MLOC_6972 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.03753 | 4.37662 | 5.13146 | 4.68881 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.95615 | 4.40734 | 5.02465 | 3.27014 |
| INF1 | Young developing inflorescences (5mm) | 0.584117 | 1.0593 | 0.84162 | 0.64324 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.08594 | 0.861777 | 0.785062 | 0.91766 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 8.00875 | 7.16535 | 8.76446 | 8.05215 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.46681 | 6.18955 | 7.24619 | 16.957 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.46207 | 1.60125 | 1.36059 | 1.33127 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.37547 | 1.62827 | 1.15202 | 2.98042 |
CDS Structure of MLOC_6972
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6972.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g65890.1 |
-1 |
0.0 |
848 |
462/699 (66%) |
13101.m07127 protein DNA repair metallo-beta-lactamase, putative, expressed |
| TAIR PP10 |
AT1G19025.1 |
-1 |
2e-137 |
441 |
231/457 (51%) |
DNA repair metallo-beta-lactamase family protein | chr1:6568920-6570800 FORWARD LENGTH=549 |
