MLOC_69715 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.2546311.57819.629728.79371
LEAShoots from the seedlings (10 cm shoot stage)6.983198.632456.786456.2056
INF1Young developing inflorescences (5mm)14.626613.93613.734811.2234
INF2Developing inflorescences (1-1.5 cm)11.325610.358610.883811.2754
ROORoots from the seedlings (10 cm shoot stage)3.22366.530465.198876.98562
NODDeveloping tillers at six leaf stage, 3rd internode1.251741.985685.398028.14047
CAR5Developing grain, bracts removed (5 DPA)7.114236.54857.049826.35005
CAR15Developing grain, bracts removed (15 DPA)3.063512.685921.886225.80483



CDS Structure of MLOC_69715






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69715.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370475NoneNoneNoneNone
MLOC_69715.4CUST_18385_PI427708080AvailableAvailablecontig_56852 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g63910.2 -3 0.0 1050 653/1250 (52%) 13101.m06862 protein AT hook motif family protein, expressed
TAIR PP10 AT1G19485.2 -3 6e-130 426 257/649 (40%) Transducin/WD40 repeat-like superfamily protein | chr1:6747167-6751443 FORWARD LENGTH=815