MLOC_6971 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.5711 | 16.2395 | 17.5886 | 13.397 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 20.9444 | 26.9523 | 19.6403 | 18.2204 |
| INF1 | Young developing inflorescences (5mm) | 12.8934 | 13.394 | 12.2432 | 9.89062 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.4155 | 12.1222 | 14.2057 | 12.9228 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.382 | 29.4807 | 30.2162 | 33.5367 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.0786 | 13.0261 | 14.5443 | 49.9435 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.4866 | 4.45275 | 4.78025 | 4.28615 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.7749 | 14.3465 | 12.4974 | 26.7573 |
CDS Structure of MLOC_6971
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6971.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g65900.1 |
+2 |
0.0 |
923 |
480/569 (84%) |
13101.m07128 protein chitin-inducible gibberellin-responsive protein, putative, expressed |
| TAIR PP10 |
AT1G21450.1 |
+2 |
2e-178 |
531 |
266/446 (60%) |
| Symbols: SCL1 | SCARECROW-like 1 | chr1:7509721-7511502 FORWARD LENGTH=593 |
