MLOC_69707 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.066332.473872.445292.38352
LEAShoots from the seedlings (10 cm shoot stage)4.204090.68081.17381.59292
INF1Young developing inflorescences (5mm)1.397921.520891.343941.30059
INF2Developing inflorescences (1-1.5 cm)1.521672.057281.699642.10082
ROORoots from the seedlings (10 cm shoot stage)3.272921.619651.508751.89321
NODDeveloping tillers at six leaf stage, 3rd internode4.654316.5231110.161518.8045
CAR5Developing grain, bracts removed (5 DPA)7.809356.980555.08576.78986
CAR15Developing grain, bracts removed (15 DPA)1.791781.369532.082024.43499



CDS Structure of MLOC_69707






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69707.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354761NoneNoneNoneNone
MLOC_69707.1CUST_18384_PI427708080AvailableAvailablecontig_56852 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g04150.1 -3 0.0 635 381/466 (82%) 13107.m00352 protein stress-induced protein, putative, expressed
TAIR PP10 AT1G10020.1 -3 7e-147 441 258/469 (55%) Protein of unknown function (DUF1005) | chr1:3269939-3271732 REVERSE LENGTH=461