MLOC_69701 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.886551.328350.7919241.31676
LEAShoots from the seedlings (10 cm shoot stage)86.2456172.082194.094121.579
INF1Young developing inflorescences (5mm)1.05410.2062710.5789060.534891
INF2Developing inflorescences (1-1.5 cm)0.2147890.1737680.4304630.293534
ROORoots from the seedlings (10 cm shoot stage)00.5451742.086661.15771
NODDeveloping tillers at six leaf stage, 3rd internode0.3959691.051052.049333.61543
CAR5Developing grain, bracts removed (5 DPA)4.451154.553523.871464.47438
CAR15Developing grain, bracts removed (15 DPA)1.034921.006811.106152.62311



CDS Structure of MLOC_69701






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69701.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369588NoneNoneNoneNone
MLOC_69701.1CUST_5798_PI427708080AvailableAvailablecontig_56841 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g46330.1 +3 2e-116 344 217/296 (73%) 13107.m04879 protein uncharacterized UPF0114 domain containing protein, expressed
TAIR PP10 AT5G13720.1 +3 7e-94 285 157/184 (85%) Uncharacterised protein family (UPF0114) | chr5:4427960-4429029 FORWARD LENGTH=262