MLOC_69668 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains65.791113.80699.685105.549
LEAShoots from the seedlings (10 cm shoot stage)83.382559.626352.379461.2342
INF1Young developing inflorescences (5mm)207.989192.825172.841169.867
INF2Developing inflorescences (1-1.5 cm)188.159167.357166.262198.925
ROORoots from the seedlings (10 cm shoot stage)39.361793.481776.7393117.779
NODDeveloping tillers at six leaf stage, 3rd internode19.027120.365118.490676.7265
CAR5Developing grain, bracts removed (5 DPA)148.275137.405140.312146.284
CAR15Developing grain, bracts removed (15 DPA)52.676647.888944.0582114.743



CDS Structure of MLOC_69668






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69668.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252453.1NoneNoneNoneNone
MLOC_69668.2CUST_5795_PI427708080AvailableAvailablecontig_56775 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g03080.1 +2 0.0 1227 700/857 (82%) 13102.m00283 protein eukaryotic translation initiation factor 3 subunit C, putative, expressed
TAIR PP10 AT3G56150.2 +2 0.0 927 546/837 (65%) | Symbols: EIF3C | eukaryotic translation initiation factor 3C | chr3:20833790-20836820 REVERSE LENGTH=900