MLOC_69663 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5803050.9324320.8061350.80253
LEAShoots from the seedlings (10 cm shoot stage)3.535672.34291.784832.18084
INF1Young developing inflorescences (5mm)3.773464.145923.88063.19095
INF2Developing inflorescences (1-1.5 cm)4.1023.394213.872054.00787
ROORoots from the seedlings (10 cm shoot stage)0.1027040.5099220.4924220.520077
NODDeveloping tillers at six leaf stage, 3rd internode1.208111.563681.865055.15359
CAR5Developing grain, bracts removed (5 DPA)1.535571.287891.599361.38274
CAR15Developing grain, bracts removed (15 DPA)1.260811.105981.113582.61258



CDS Structure of MLOC_69663






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69663.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69663.1CUST_15439_PI427708080AvailableAvailablecontig_56773 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g36640.1 +1 0.0 895 482/894 (54%) 13101.m03710 protein disease resistance protein RPM1, putative, expressed
TAIR PP10 AT3G07040.1 +1 7e-119 400 293/921 (32%) | Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926