MLOC_69639 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.5612815.821412.675912.108
LEAShoots from the seedlings (10 cm shoot stage)9.458717.052396.551116.61209
INF1Young developing inflorescences (5mm)29.635823.829719.508119.8457
INF2Developing inflorescences (1-1.5 cm)16.926217.186814.145917.1938
ROORoots from the seedlings (10 cm shoot stage)3.7431910.37416.5824110.6264
NODDeveloping tillers at six leaf stage, 3rd internode0.27670.2530970.6732311.09228
CAR5Developing grain, bracts removed (5 DPA)16.742715.360716.308814.8099
CAR15Developing grain, bracts removed (15 DPA)6.209385.647264.7600312.1381



CDS Structure of MLOC_69639






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69639.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249441.1NoneNoneNoneNone
MLOC_69639.1CUST_5792_PI427708080AvailableAvailablecontig_5674 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g66500.1 -2 0.0 2357 1204/1421 (85%) 13101.m07198 protein phosphoribosylformylglycinamidine synthase, putative, expressed
TAIR PP10 AT1G74260.1 -2 0.0 1964 989/1350 (73%) | Symbols: PUR4 | purine biosynthesis 4 | chr1:27923005-27927764 REVERSE LENGTH=1407