MLOC_69623 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.5733311.536211.285611.04691
LEAShoots from the seedlings (10 cm shoot stage)0.6021540.4548940.4676050.406335
INF1Young developing inflorescences (5mm)7.748037.209026.442915.27736
INF2Developing inflorescences (1-1.5 cm)6.38076.942365.530826.2097
ROORoots from the seedlings (10 cm shoot stage)0.3832951.201441.076861.11262
NODDeveloping tillers at six leaf stage, 3rd internode0.03980340.02873320.04965790.100496
CAR5Developing grain, bracts removed (5 DPA)2.126592.049362.106661.76122
CAR15Developing grain, bracts removed (15 DPA)0.7057280.4821720.5221481.1584



CDS Structure of MLOC_69623






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69623.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69623.1CUST_15432_PI427708080AvailableAvailablecontig_5671 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g50910.3 +3 0.0 4049 2114/2700 (78%) 13106.m10581 protein Phosphatidylinositol kinase and FAT containing domain protein, putative, expressed
TAIR PP10 AT5G40820.1 +3 0.0 2749 1498/2711 (55%) | Symbols: ATRAD3, ATR, ATATR | Ataxia telangiectasia-mutated and RAD3-related | chr5:16343860-16353847 REVERSE LENGTH=2702