MLOC_69619 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains84.968699.531394.419892.4793
LEAShoots from the seedlings (10 cm shoot stage)88.922250.60750.278753.0528
INF1Young developing inflorescences (5mm)76.114871.113866.029758.241
INF2Developing inflorescences (1-1.5 cm)60.490970.735958.651668.705
ROORoots from the seedlings (10 cm shoot stage)65.657697.497471.5418104.477
NODDeveloping tillers at six leaf stage, 3rd internode105.3592.415165.9486272.202
CAR5Developing grain, bracts removed (5 DPA)97.587696.121296.823691.7638
CAR15Developing grain, bracts removed (15 DPA)18.090817.208816.844739.1836



CDS Structure of MLOC_69619






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69619.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249862.1NoneNoneNoneNone
MLOC_69619.1CUST_5786_PI427708080AvailableAvailablecontig_56701 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48240.1 +1 0.0 1120 579/609 (95%) 13105.m05121 protein dynamin family protein, putative, expressed
TAIR PP10 AT5G42080.1 +1 0.0 992 504/610 (83%) | Symbols: ADL1, ADL1A, AG68, DRP1A, RSW9, DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=610