MLOC_69589 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.528726.883127.074927.2018
LEAShoots from the seedlings (10 cm shoot stage)11.711540.786994.957745.8142
INF1Young developing inflorescences (5mm)0.03588220.0421550.04535190.0401276
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)29.332516.472618.307822.346
NODDeveloping tillers at six leaf stage, 3rd internode0.1228590.05784510.04850.160674
CAR5Developing grain, bracts removed (5 DPA)00.086384200.127849
CAR15Developing grain, bracts removed (15 DPA)0.225510.4464870.1813650.8756



CDS Structure of MLOC_69589






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69589.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354328NoneNoneNoneNone
MLOC_69589.1CUST_5782_PI427708080AvailableAvailablecontig_56656 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g34910.1 +2 3e-95 286 146/232 (63%) 13110.m03118 protein secretory protein, putative, expressed
TAIR PP10 AT2G15220.1 +2 3e-83 254 122/229 (53%) Plant basic secretory protein (BSP) family protein | chr2:6608689-6609366 FORWARD LENGTH=225