MLOC_69581 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6364540.513120.7655680.64021
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)1.029030.573920.2694450.728127
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_69581






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69581.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69581.1CUST_15422_PI427708080AvailableAvailablecontig_5664 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g06990.1 -3 0.0 541 327/698 (47%) 13104.m00617 protein conserved hypothetical protein
TAIR PP10 AT5G45530.1 -3 1e-40 160 118/407 (29%) Protein of unknown function (DUF594) | chr5:18454316-18457222 REVERSE LENGTH=798