MLOC_69561 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.093355.863195.967955.94344
LEAShoots from the seedlings (10 cm shoot stage)12.630216.402715.1212.5689
INF1Young developing inflorescences (5mm)14.71068.657386.807868.90696
INF2Developing inflorescences (1-1.5 cm)6.909786.705188.270778.18704
ROORoots from the seedlings (10 cm shoot stage)4.871395.969514.748826.98307
NODDeveloping tillers at six leaf stage, 3rd internode14.72437.8501512.713128.0702
CAR5Developing grain, bracts removed (5 DPA)7.058386.359536.294876.71176
CAR15Developing grain, bracts removed (15 DPA)1.066071.038241.291462.71987



CDS Structure of MLOC_69561






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69561.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK377109NoneNoneNoneNone
MLOC_69561.1CUST_5776_PI427708080AvailableAvailablecontig_56616 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62460.2 +1 0.0 997 547/722 (76%) 13101.m06693 protein ZOS1-16 - C2H2 zinc finger protein, expressed
TAIR PP10 AT1G07530.1 +1 4e-161 499 303/725 (42%) | Symbols: SCL14, ATGRAS2, GRAS2 | SCARECROW-like 14 | chr1:2313828-2316137 REVERSE LENGTH=769