MLOC_69555 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.682173.692464.985123.85562
LEAShoots from the seedlings (10 cm shoot stage)3.967192.724935.899593.1779
INF1Young developing inflorescences (5mm)8.622227.949048.301096.7731
INF2Developing inflorescences (1-1.5 cm)11.77728.1416111.646910.6983
ROORoots from the seedlings (10 cm shoot stage)5.331397.122776.067687.02753
NODDeveloping tillers at six leaf stage, 3rd internode0.9083631.147842.167253.44188
CAR5Developing grain, bracts removed (5 DPA)9.5647810.07149.520999.09586
CAR15Developing grain, bracts removed (15 DPA)2.795243.020012.455796.20558



CDS Structure of MLOC_69555






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69555.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69555.3CUST_15418_PI427708080AvailableAvailablecontig_5661 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g32330.1 +3 1e-117 345 183/258 (71%) 13112.m03299 protein peroxisomal membrane protein, putative, expressed
TAIR PP10 AT5G43140.1 +3 9e-81 249 109/181 (60%) Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | chr5:17321570-17323224 FORWARD LENGTH=254