MLOC_69539 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains61.039539.067940.383643.9934
LEAShoots from the seedlings (10 cm shoot stage)15.640625.612355.495725.7585
INF1Young developing inflorescences (5mm)6.880137.906089.388756.91851
INF2Developing inflorescences (1-1.5 cm)6.659765.715049.417127.64143
ROORoots from the seedlings (10 cm shoot stage)89.285683.565993.491796.8137
NODDeveloping tillers at six leaf stage, 3rd internode16.945122.45851.029682.4029
CAR5Developing grain, bracts removed (5 DPA)31.005437.911635.778734.8222
CAR15Developing grain, bracts removed (15 DPA)80.712980.483264.1527188.941



CDS Structure of MLOC_69539






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69539.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK371957NoneNoneNoneNone
MLOC_69539.4CUST_5770_PI427708080AvailableAvailablecontig_56583 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g32780.1 +1 1e-63 203 101/150 (67%) 13101.m03305 protein universal stress protein domain containing protein, putative, expressed
TAIR PP10 AT1G68300.1 +1 7e-38 135 74/147 (50%) Adenine nucleotide alpha hydrolases-like superfamily protein | chr1:25598518-25599261 REVERSE LENGTH=160