MLOC_69523 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8949790.8753020.9098051.0306
LEAShoots from the seedlings (10 cm shoot stage)1.244071.028640.8654270.982686
INF1Young developing inflorescences (5mm)2.607352.489853.01552.45038
INF2Developing inflorescences (1-1.5 cm)4.538655.088954.277015.72408
ROORoots from the seedlings (10 cm shoot stage)0.9626011.181070.9123221.56109
NODDeveloping tillers at six leaf stage, 3rd internode0.7267290.8755341.111843.43069
CAR5Developing grain, bracts removed (5 DPA)3.087543.313563.085763.46252
CAR15Developing grain, bracts removed (15 DPA)1.712211.718281.671634.29358



CDS Structure of MLOC_69523






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69523.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375908NoneNoneNoneNone
MLOC_69523.2CUST_5769_PI427708080AvailableAvailablecontig_56560 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g03070.1 -1 1e-87 291 187/401 (47%) 13107.m00242 protein tetratricopeptide repeat containing protein, putative, expressed
TAIR PP10 AT4G37210.1 -1 3e-48 180 141/421 (33%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492