MLOC_69515 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.216840.5779740.6926340.729279
LEAShoots from the seedlings (10 cm shoot stage)0.054023300.1372950.0747098
INF1Young developing inflorescences (5mm)00.063564900.0674119
INF2Developing inflorescences (1-1.5 cm)0.1387140.05487070.03276950.0945434
ROORoots from the seedlings (10 cm shoot stage)13.32827.5594613.01299.02913
NODDeveloping tillers at six leaf stage, 3rd internode0.02203600.009460560.010419
CAR5Developing grain, bracts removed (5 DPA)0.07153770.1028670.03315640.0734358
CAR15Developing grain, bracts removed (15 DPA)711.659707.807809.731867.84



CDS Structure of MLOC_69515






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69515.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374681NoneNoneNoneNone
MLOC_69515.1CUST_444_PI427708083AvailableAvailablecontig_56539 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73220.1 +1 2e-157 456 237/330 (72%) 13101.m07991 protein peroxidase precursor, putative, expressed
TAIR PP10 AT1G71695.1 +1 2e-118 355 179/304 (59%) Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358