MLOC_69501 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.264823.137492.377912.6656
LEAShoots from the seedlings (10 cm shoot stage)4.089535.846744.34333.73061
INF1Young developing inflorescences (5mm)5.310437.479658.789575.79998
INF2Developing inflorescences (1-1.5 cm)14.06789.9379111.446412.5204
ROORoots from the seedlings (10 cm shoot stage)7.910958.577946.07859.32841
NODDeveloping tillers at six leaf stage, 3rd internode2.797175.150846.1253215.6211
CAR5Developing grain, bracts removed (5 DPA)6.00886.238645.997495.89506
CAR15Developing grain, bracts removed (15 DPA)1.31841.611761.913993.67863



CDS Structure of MLOC_69501






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69501.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69501.1CUST_15413_PI427708080AvailableAvailablecontig_5652 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55150.2 +1 0.0 539 297/375 (79%) 13104.m05714 protein UBA/TS-N domain containing protein, expressed
TAIR PP10 AT2G12550.1 +1 3e-114 356 197/374 (53%) ubiquitin-associated (UBA)/TS-N domain-containing protein | chr2:5114881-5118486 FORWARD LENGTH=562