MLOC_6950 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.134453 | 0.0762636 | 0 | 0.127862 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0685515 | 0 | 0.0826559 |
| INF1 | Young developing inflorescences (5mm) | 0.0557215 | 0.0335587 | 0 | 0.0448376 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0 | 0.0369739 | 0.0453084 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.273705 | 1.32978 | 0.097045 | 1.71947 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.342364 | 0.183262 | 0.509391 | 0.79629 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.257194 | 0.243165 | 0.235432 | 0.331379 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.177772 | 0.0265204 | 0.256249 | 0.412335 |
CDS Structure of MLOC_6950
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6950.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g46480.2 |
-3 |
8e-48 |
162 |
119/233 (51%) |
13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed |
| TAIR PP10 |
AT3G15670.1 |
-3 |
1e-23 |
98 |
81/229 (35%) |
Late embryogenesis abundant protein (LEA) family protein | chr3:5310141-5310901 REVERSE LENGTH=225 |
