MLOC_69499 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.021321.909620.553419.9653
LEAShoots from the seedlings (10 cm shoot stage)9.990184.524414.505245.36861
INF1Young developing inflorescences (5mm)66.527667.547965.632949.5007
INF2Developing inflorescences (1-1.5 cm)48.980452.557347.608448.7391
ROORoots from the seedlings (10 cm shoot stage)8.2059615.2416.870815.6767
NODDeveloping tillers at six leaf stage, 3rd internode1.974261.675571.931695.51348
CAR5Developing grain, bracts removed (5 DPA)17.112816.413718.745514.6246
CAR15Developing grain, bracts removed (15 DPA)2.733752.22612.321334.9074



CDS Structure of MLOC_69499






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69499.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367712NoneNoneNoneNone
MLOC_69499.1CUST_5767_PI427708080AvailableAvailablecontig_5652 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g29390.1 +1 0.0 839 411/521 (79%) 13111.m02835 protein bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed
TAIR PP10 AT2G16370.1 +1 0.0 776 371/502 (74%) | Symbols: THY-1 | thymidylate synthase 1 | chr2:7082038-7084333 REVERSE LENGTH=519