- Predicted Gene MLOC_69498
MLOC_69498 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_69498_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_69498_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.16233 | 13.004 | 11.852 | 10.8654 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 961.544 | 2033.94 | 2067.48 | 1267.98 |
INF1 | Young developing inflorescences (5mm) | 6.0053 | 4.22658 | 4.08823 | 4.17187 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.41447 | 5.19515 | 6.69566 | 6.47338 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.51568 | 7.88254 | 22.554 | 9.57964 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1231.56 | 883.014 | 968.494 | 2382.28 |
CAR5 | Developing grain, bracts removed (5 DPA) | 111.435 | 134.913 | 119.327 | 124.482 |
CAR15 | Developing grain, bracts removed (15 DPA) | 20.4375 | 25.4764 | 26.386 | 59.2508 |
CDS Structure of MLOC_69498
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69498.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
-3 |
1e-163 |
468 |
234/265 (88%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34430.1 |
-3 |
3e-156 |
448 |
229/266 (86%) |
| Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266 |