MLOC_69498 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.1623313.00411.85210.8654
LEAShoots from the seedlings (10 cm shoot stage)961.5442033.942067.481267.98
INF1Young developing inflorescences (5mm)6.00534.226584.088234.17187
INF2Developing inflorescences (1-1.5 cm)5.414475.195156.695666.47338
ROORoots from the seedlings (10 cm shoot stage)3.515687.8825422.5549.57964
NODDeveloping tillers at six leaf stage, 3rd internode1231.56883.014968.4942382.28
CAR5Developing grain, bracts removed (5 DPA)111.435134.913119.327124.482
CAR15Developing grain, bracts removed (15 DPA)20.437525.476426.38659.2508



CDS Structure of MLOC_69498






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69498.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248764.1NoneNoneNoneNone
MLOC_69498.1CUST_5766_PI427708080AvailableAvailablecontig_56519 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g52240.1 -3 1e-163 468 234/265 (88%) 13101.m05463 protein chlorophyll A-B binding protein, putative, expressed
TAIR PP10 AT2G34430.1 -3 3e-156 448 229/266 (86%) | Symbols: LHB1B1, LHCB1.4 | light-harvesting chlorophyll-protein complex II subunit B1 | chr2:14524818-14525618 FORWARD LENGTH=266