MLOC_69487 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7810261.196490.9807121.02586
LEAShoots from the seedlings (10 cm shoot stage)0.5437880.3582160.3723720.365847
INF1Young developing inflorescences (5mm)3.009452.917682.697422.48153
INF2Developing inflorescences (1-1.5 cm)2.446162.787462.669342.8752
ROORoots from the seedlings (10 cm shoot stage)0.6305210.7505380.7309140.857234
NODDeveloping tillers at six leaf stage, 3rd internode0.1941430.412450.7779871.50657
CAR5Developing grain, bracts removed (5 DPA)66.836181.783184.507475.1011
CAR15Developing grain, bracts removed (15 DPA)3.077142.093893.581616.5705



CDS Structure of MLOC_69487






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69487.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372397NoneNoneNoneNone
MLOC_69487.3CUST_18382_PI427708080AvailableAvailablecontig_56480 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g42120.1 -1 0.0 1094 605/722 (84%) 13112.m04422 protein PPR repeat containing protein
TAIR PP10 AT1G30290.1 -1 0.0 724 379/673 (56%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:10670320-10672740 REVERSE LENGTH=806