- Predicted Gene MLOC_69487
MLOC_69487 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_69487_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_69487_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.781026 | 1.19649 | 0.980712 | 1.02586 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.543788 | 0.358216 | 0.372372 | 0.365847 |
INF1 | Young developing inflorescences (5mm) | 3.00945 | 2.91768 | 2.69742 | 2.48153 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.44616 | 2.78746 | 2.66934 | 2.8752 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.630521 | 0.750538 | 0.730914 | 0.857234 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.194143 | 0.41245 | 0.777987 | 1.50657 |
CAR5 | Developing grain, bracts removed (5 DPA) | 66.8361 | 81.7831 | 84.5074 | 75.1011 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.07714 | 2.09389 | 3.58161 | 6.5705 |
CDS Structure of MLOC_69487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69487.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g42120.1 |
-1 |
0.0 |
1094 |
605/722 (84%) |
13112.m04422 protein PPR repeat containing protein |
TAIR PP10 |
AT1G30290.1 |
-1 |
0.0 |
724 |
379/673 (56%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:10670320-10672740 REVERSE LENGTH=806 |