- Predicted Gene MLOC_69480
MLOC_69480 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_69480_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_69480_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.17521 | 1.9209 | 1.37617 | 1.80189 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.10077 | 1.31821 | 1.41967 | 1.01244 |
INF1 | Young developing inflorescences (5mm) | 2.889 | 2.81592 | 2.17953 | 2.20908 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.23052 | 2.53082 | 3.03007 | 3.08993 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.685614 | 1.58332 | 1.67101 | 1.57771 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.700538 | 1.11472 | 0.759793 | 3.12454 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.73857 | 2.8574 | 2.70756 | 2.61608 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.50237 | 1.54144 | 1.11765 | 3.23568 |
CDS Structure of MLOC_69480
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69480.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g34160.1 |
-2 |
7e-134 |
402 |
224/363 (62%) |
13105.m03547 protein mTERF domain containing protein, expressed |
TAIR PP10 |
AT5G07900.1 |
-2 |
3e-33 |
132 |
92/308 (30%) |
Mitochondrial transcription termination factor family protein | chr5:2520188-2521405 FORWARD LENGTH=405 |