MLOC_6948 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 27.8555 | 23.983 | 27.8408 | 19.8128 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.5133 | 42.4179 | 50.7519 | 27.2301 |
| INF1 | Young developing inflorescences (5mm) | 6.4438 | 8.45575 | 10.7915 | 4.91544 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.80619 | 6.40416 | 8.37943 | 6.29318 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 39.1106 | 33.1193 | 33.7064 | 32.4091 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 37.074 | 34.5324 | 39.1512 | 99.6797 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.52913 | 6.75602 | 8.63563 | 5.31842 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.99963 | 3.28914 | 2.80409 | 4.98947 |
CDS Structure of MLOC_6948
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6948.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g26954.2 |
+3 |
2e-93 |
290 |
142/200 (71%) |
13105.m10315 protein saposin-like type B, region 1 family protein, putative, expressed |
| TAIR PP10 |
AT3G51730.1 |
+3 |
2e-43 |
155 |
70/191 (37%) |
saposin B domain-containing protein | chr3:19186970-19188436 FORWARD LENGTH=213 |