MLOC_69476 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.844697.802368.995759.04584
LEAShoots from the seedlings (10 cm shoot stage)8.452136.665667.82387.06019
INF1Young developing inflorescences (5mm)7.092389.008738.540877.4002
INF2Developing inflorescences (1-1.5 cm)7.536337.923227.665878.77636
ROORoots from the seedlings (10 cm shoot stage)6.801917.791399.6299910.6737
NODDeveloping tillers at six leaf stage, 3rd internode9.32587.062827.137624.7864
CAR5Developing grain, bracts removed (5 DPA)7.907118.275317.663798.14526
CAR15Developing grain, bracts removed (15 DPA)3.212713.796163.586168.62059



CDS Structure of MLOC_69476






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69476.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252502.1NoneNoneNoneNone
MLOC_69476.1CUST_5763_PI427708080AvailableAvailablecontig_56473 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g29469.1 -3 6e-104 310 150/195 (77%) 13101.m03062 protein dual specificity protein phosphatase, putative, expressed
TAIR PP10 AT3G23610.1 -3 2e-55 184 92/171 (54%) | Symbols: DSPTP1 | dual specificity protein phosphatase 1 | chr3:8478280-8479521 FORWARD LENGTH=198