MLOC_69468 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.6070715.918516.175813.4187
LEAShoots from the seedlings (10 cm shoot stage)16.85040.2769193.261435.59656
INF1Young developing inflorescences (5mm)0.8875920.2529670.2749310.428461
INF2Developing inflorescences (1-1.5 cm)0.4321211.644070.487781.21103
ROORoots from the seedlings (10 cm shoot stage)7.141256.767018.498347.78322
NODDeveloping tillers at six leaf stage, 3rd internode7.29044.189520.3842058.51278
CAR5Developing grain, bracts removed (5 DPA)13.894416.122213.089115.6202
CAR15Developing grain, bracts removed (15 DPA)0.4750380.1090260.4125530.859539



CDS Structure of MLOC_69468






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69468.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69468.1CUST_9332_PI427708083AvailableAvailablecontig_5647 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51620.1 +1 7e-45 158 74/81 (91%) 13102.m05875 protein glycosyl hydrolase family 3 protein, putative, expressed
TAIR PP10 AT1G78060.1 +1 3e-23 96 47/85 (55%) Glycosyl hydrolase family protein | chr1:29349796-29352868 REVERSE LENGTH=767