MLOC_69460 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.8745811.036210.036810.0291
LEAShoots from the seedlings (10 cm shoot stage)437.871733.866651.725503.775
INF1Young developing inflorescences (5mm)24.414321.54225.192821.6405
INF2Developing inflorescences (1-1.5 cm)21.872620.968129.163926.9397
ROORoots from the seedlings (10 cm shoot stage)2.444773.5777712.65375.47669
NODDeveloping tillers at six leaf stage, 3rd internode398.824355.522428.7431032.21
CAR5Developing grain, bracts removed (5 DPA)165.289193.06174.53185.602
CAR15Developing grain, bracts removed (15 DPA)13.454617.134617.250239.3027



CDS Structure of MLOC_69460






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69460.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354183NoneNoneNoneNone
MLOC_69460.2CUST_5761_PI427708080AvailableAvailablecontig_56456 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33830.1 -1 5e-79 241 110/125 (88%) 13104.m03280 protein membrane protein, putative, expressed
TAIR PP10 AT1G08380.1 -1 1e-57 185 91/121 (75%) | Symbols: PSAO | photosystem I subunit O | chr1:2641004-2641739 REVERSE LENGTH=140