MLOC_69443 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains22.846551.931845.352131.9101
LEAShoots from the seedlings (10 cm shoot stage)28.821610.471115.568612.9537
INF1Young developing inflorescences (5mm)39.842236.988333.664226.7769
INF2Developing inflorescences (1-1.5 cm)26.875126.559127.865626.3472
ROORoots from the seedlings (10 cm shoot stage)13.4541.711935.573830.1304
NODDeveloping tillers at six leaf stage, 3rd internode27.592712.85188.4124323.4336
CAR5Developing grain, bracts removed (5 DPA)30.896732.584131.456227.0757
CAR15Developing grain, bracts removed (15 DPA)4.730483.533145.659118.80099



CDS Structure of MLOC_69443






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69443.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69443.1CUST_13068_PI427708083AvailableAvailablecontig_56438 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g10980.1 -2 4e-33 127 62/72 (86%) 13111.m01163 protein pyruvate kinase, putative, expressed
TAIR PP10 AT3G52990.1 -2 2e-25 105 48/68 (71%) Pyruvate kinase family protein | chr3:19649046-19652237 FORWARD LENGTH=527