- Predicted Gene MLOC_69436
MLOC_69436 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 307.274 | 349.269 | 333.209 | 300.665 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 253.888 | 136.612 | 129.592 | 146.094 |
| INF1 | Young developing inflorescences (5mm) | 706.098 | 629.67 | 718.6 | 526.84 |
| INF2 | Developing inflorescences (1-1.5 cm) | 654.046 | 606.054 | 762.207 | 658.972 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 440.7 | 392.361 | 479.194 | 455.944 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 118.234 | 120.764 | 192.875 | 445.23 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 443.481 | 407.587 | 455.282 | 380.15 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 366.618 | 322.637 | 352.559 | 701.523 |
CDS Structure of MLOC_69436
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69436.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g48750.2 |
+3 |
0.0 |
807 |
406/414 (98%) |
13106.m05188 protein DEAD-box ATP-dependent RNA helicase, putative, expressed |
| TAIR PP10 |
AT3G13920.1 |
+3 |
0.0 |
760 |
381/414 (92%) |
| Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412 |
