MLOC_69387 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.159531.862262.330751.52632
LEAShoots from the seedlings (10 cm shoot stage)0.2150830.1458470.04572680.105192
INF1Young developing inflorescences (5mm)2.689662.312912.036921.80229
INF2Developing inflorescences (1-1.5 cm)3.038513.329413.689443.24453
ROORoots from the seedlings (10 cm shoot stage)0.7914380.8999491.417190.884178
NODDeveloping tillers at six leaf stage, 3rd internode1.296570.5832420.4829661.38385
CAR5Developing grain, bracts removed (5 DPA)2.362071.943692.345091.87426
CAR15Developing grain, bracts removed (15 DPA)0.2731470.1669030.3029280.528102



CDS Structure of MLOC_69387






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69387.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69387.1CUST_13066_PI427708083AvailableAvailablecontig_56342 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35300.1 -1 2e-82 279 150/224 (67%) 13107.m03608 protein TKL_IRAK_DUF26-lc.11 - DUF26 kinases have homology to DUF26 containing loci, expressed
TAIR PP10 AT4G23180.1 -1 5e-37 148 85/220 (39%) | Symbols: CRK10, RLK4 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | chr4:12138171-12140780 FORWARD LENGTH=669