MLOC_69381 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.475812.804492.94782.83143
LEAShoots from the seedlings (10 cm shoot stage)8.18059.490179.601576.83786
INF1Young developing inflorescences (5mm)3.158632.444162.804012.44055
INF2Developing inflorescences (1-1.5 cm)1.493941.196491.914441.67814
ROORoots from the seedlings (10 cm shoot stage)10.07167.014966.366347.18915
NODDeveloping tillers at six leaf stage, 3rd internode11.18249.7188517.132730.009
CAR5Developing grain, bracts removed (5 DPA)9.446189.050999.002829.18551
CAR15Developing grain, bracts removed (15 DPA)0.216090.3385330.1662290.641342



CDS Structure of MLOC_69381






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69381.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374888NoneNoneNoneNone
MLOC_69381.1CUST_18380_PI427708080AvailableAvailablecontig_56336 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g43440.1 +1 0.0 662 373/432 (86%) 13103.m04669 protein CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G14580.1 +1 6e-124 375 207/415 (50%) | Symbols: CIPK4, SnRK3.3 | CBL-interacting protein kinase 4 | chr4:8367887-8369167 REVERSE LENGTH=426