- Predicted Gene MLOC_69359
MLOC_69359 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.58441 | 9.39618 | 9.56552 | 6.47929 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.97049 | 7.18182 | 9.49697 | 5.85808 |
INF1 | Young developing inflorescences (5mm) | 19.9924 | 21.0007 | 22.1926 | 12.7961 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.5751 | 20.2586 | 25.2423 | 19.3273 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.84639 | 9.9805 | 9.82799 | 7.55918 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.33794 | 3.37951 | 6.42506 | 10.1687 |
CAR5 | Developing grain, bracts removed (5 DPA) | 4.67887 | 5.37659 | 5.18993 | 3.61492 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.72892 | 8.9191 | 8.01326 | 13.9445 |
CDS Structure of MLOC_69359
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_69359.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g01940.1 |
+3 |
1e-26 |
108 |
68/109 (62%) |
13107.m00116 protein sister chromatid cohesion 2, putative, expressed |
TAIR PP10 |
AT5G15540.1 |
+3 |
7e-18 |
82 |
54/110 (49%) |
| Symbols: EMB2773, ATSCC2, SCC2 | PHD finger family protein | chr5:5047887-5057411 REVERSE LENGTH=1846 |