MLOC_6934 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.38113.142123.36233.40012
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5177680.3969640.6092410.549908
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.1165980.03858800.239151



CDS Structure of MLOC_6934






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6934.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6934.1CUST_15387_PI427708080AvailableAvailablecontig_138355 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58520.1 -3 0.0 819 405/493 (82%) 13102.m06775 protein CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT4G35310.1 -3 0.0 743 369/505 (73%) | Symbols: CPK5, ATCPK5 | calmodulin-domain protein kinase 5 | chr4:16802436-16804628 FORWARD LENGTH=556