MLOC_69325 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains34.972532.126729.055830.3477
LEAShoots from the seedlings (10 cm shoot stage)21.529819.877222.412417.35
INF1Young developing inflorescences (5mm)0.8977480.1677690.6053150.45068
INF2Developing inflorescences (1-1.5 cm)0.446150.3188110.44560.404183
ROORoots from the seedlings (10 cm shoot stage)46.038847.147630.192550.3859
NODDeveloping tillers at six leaf stage, 3rd internode16.932716.019820.553453.1857
CAR5Developing grain, bracts removed (5 DPA)2.960752.152251.955152.11248
CAR15Developing grain, bracts removed (15 DPA)0.5315020.5581460.4133821.09218



CDS Structure of MLOC_69325






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69325.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252032.1NoneNoneNoneNone
MLOC_69325.1CUST_18377_PI427708080AvailableAvailablecontig_56258 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g11590.1 -2 3e-180 518 319/370 (86%) 13103.m01311 protein integral membrane protein, putative, expressed
TAIR PP10 AT1G76340.1 -2 2e-142 420 249/327 (76%) | Symbols: GONST3 | golgi nucleotide sugar transporter 3 | chr1:28635188-28636306 REVERSE LENGTH=372