MLOC_69320 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.14614.28413.564812.4741
LEAShoots from the seedlings (10 cm shoot stage)12.26319.698117.393038.20115
INF1Young developing inflorescences (5mm)34.597129.851128.52125.1743
INF2Developing inflorescences (1-1.5 cm)28.397729.00428.00729.714
ROORoots from the seedlings (10 cm shoot stage)9.9068115.43614.86716.6778
NODDeveloping tillers at six leaf stage, 3rd internode2.409023.510577.5292813.5341
CAR5Developing grain, bracts removed (5 DPA)20.219719.747420.624318.3414
CAR15Developing grain, bracts removed (15 DPA)5.562055.425454.8265211.7444



CDS Structure of MLOC_69320






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69320.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69320.1CUST_15382_PI427708080AvailableAvailablecontig_5625 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g38570.1 -3 0.0 1459 717/846 (85%) 13108.m04093 protein WD domain, G-beta repeat domain containing protein, expressed
TAIR PP10 AT1G49540.1 -3 0.0 1011 503/833 (60%) | Symbols: ELP2, AtELP2 | elongator protein 2 | chr1:18333767-18337382 REVERSE LENGTH=838