MLOC_69314 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.691618.237216.758516.0003
LEAShoots from the seedlings (10 cm shoot stage)14.203310.400914.303311.5976
INF1Young developing inflorescences (5mm)20.874923.78725.642618.8846
INF2Developing inflorescences (1-1.5 cm)51.380935.387322.537439.871
ROORoots from the seedlings (10 cm shoot stage)10.57212.840212.498615.022
NODDeveloping tillers at six leaf stage, 3rd internode10.44424.580425.17781.723
CAR5Developing grain, bracts removed (5 DPA)28.523917.156824.661120.553
CAR15Developing grain, bracts removed (15 DPA)9.37189.283716.5857319.4915



CDS Structure of MLOC_69314






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69314.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69314.1CUST_9311_PI427708083AvailableAvailablecontig_56234 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g58560.3 +3 2e-67 219 104/114 (91%) 13102.m12474 protein 1,3-beta-glucan synthase component, putative, expressed
TAIR PP10 AT5G13000.2 +3 4e-62 207 97/114 (85%) | Symbols: ATGSL12, gsl12 | glucan synthase-like 12 | chr5:4110445-4121202 REVERSE LENGTH=1914