MLOC_69312 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1269.95976.8591039.781172.97
LEAShoots from the seedlings (10 cm shoot stage)578.809427.9498.071454.357
INF1Young developing inflorescences (5mm)846.203968.38949.052829.627
INF2Developing inflorescences (1-1.5 cm)618.372812.688722.991852.53
ROORoots from the seedlings (10 cm shoot stage)1011.63880.574835.9011209.87
NODDeveloping tillers at six leaf stage, 3rd internode711.709524.285290.9841676.68
CAR5Developing grain, bracts removed (5 DPA)679.995730.751733.583761.379
CAR15Developing grain, bracts removed (15 DPA)115.535114.768114.835284.614



CDS Structure of MLOC_69312






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69312.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249664.1NoneNoneNoneNone
MLOC_69312.2CUST_5743_PI427708080AvailableAvailablecontig_56227 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50290.3 +3 1e-172 490 252/261 (97%) 13103.m05469 protein 14-3-3 protein, putative, expressed
TAIR PP10 AT5G38480.1 +3 1e-148 428 219/253 (87%) | Symbols: GRF3, RCI1 | general regulatory factor 3 | chr5:15410277-15411285 FORWARD LENGTH=255