MLOC_69301 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.397932.914163.326763.00559
LEAShoots from the seedlings (10 cm shoot stage)5.195932.929193.097853.0299
INF1Young developing inflorescences (5mm)1.810211.787922.718281.67008
INF2Developing inflorescences (1-1.5 cm)2.480712.640262.875382.75696
ROORoots from the seedlings (10 cm shoot stage)7.442043.4493.079244.48514
NODDeveloping tillers at six leaf stage, 3rd internode3.508743.859922.1436710.2425
CAR5Developing grain, bracts removed (5 DPA)2.356192.652122.442492.29542
CAR15Developing grain, bracts removed (15 DPA)2.431222.262632.251885.2631



CDS Structure of MLOC_69301






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69301.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69301.1CUST_15380_PI427708080AvailableAvailablecontig_56213 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g50230.1 -2 4e-121 379 204/294 (69%) 13102.m05700 protein peptidase, putative, expressed
TAIR PP10 AT5G51740.1 -2 1e-71 245 138/291 (47%) Peptidase family M48 family protein | chr5:21017110-21018987 FORWARD LENGTH=442