MLOC_69286 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.006161.113151.143410.88458
LEAShoots from the seedlings (10 cm shoot stage)1.258020.9082121.532130.888361
INF1Young developing inflorescences (5mm)2.177291.887492.079111.36709
INF2Developing inflorescences (1-1.5 cm)2.356711.922082.175061.89684
ROORoots from the seedlings (10 cm shoot stage)1.066141.000561.090520.986203
NODDeveloping tillers at six leaf stage, 3rd internode0.3122130.3203840.5345340.953955
CAR5Developing grain, bracts removed (5 DPA)1.832121.61482.396361.43866
CAR15Developing grain, bracts removed (15 DPA)0.9809740.9100180.6677341.61625



CDS Structure of MLOC_69286






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69286.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_69286.2CUST_17809_PI427708080AvailableAvailablecontig_5620 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g54200.2 -1 0.0 767 402/449 (90%) 13102.m06207 protein mitochondrial transcription termination factor family protein, putative, expressed
TAIR PP10 AT2G44020.1 -1 0.0 581 288/449 (64%) Mitochondrial transcription termination factor family protein | chr2:18217737-18219260 REVERSE LENGTH=507