MLOC_6928 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.197340.5350170.4956830.754293
LEAShoots from the seedlings (10 cm shoot stage)0.5813720.5103870.5853550.511046
INF1Young developing inflorescences (5mm)1.52770.9851051.318971.15586
INF2Developing inflorescences (1-1.5 cm)1.012651.069891.230331.27364
ROORoots from the seedlings (10 cm shoot stage)0.3847560.5838370.2753460.685675
NODDeveloping tillers at six leaf stage, 3rd internode0.03615110.01737020.03727610.0707463
CAR5Developing grain, bracts removed (5 DPA)0.8053820.6264450.6812440.733897
CAR15Developing grain, bracts removed (15 DPA)0.07953570.2412660.05815580.381639



CDS Structure of MLOC_6928






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6928.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6928.1CUST_15375_PI427708080AvailableAvailablecontig_138343 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g34700.1 +1 0.0 602 293/378 (78%) 13102.m03760 protein conserved hypothetical protein
TAIR PP10 AT3G15930.1 +1 9e-89 293 149/369 (40%) Pentatricopeptide repeat (PPR) superfamily protein | chr3:5387444-5389690 FORWARD LENGTH=687