MLOC_6927 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.5226 | 15.6959 | 14.6644 | 12.4137 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 15.6629 | 15.8873 | 19.0292 | 12.7947 |
| INF1 | Young developing inflorescences (5mm) | 14.4444 | 17.0275 | 17.0409 | 11.0059 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.8394 | 19.4415 | 18.3911 | 17.2316 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 14.2275 | 15.6686 | 16.2957 | 16.0384 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.4614 | 21.4497 | 18.5278 | 62.6746 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.679 | 15.2723 | 14.0621 | 11.3243 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.44532 | 5.22347 | 6.51887 | 10.1034 |
CDS Structure of MLOC_6927
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6927.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g34040.1 |
+3 |
0.0 |
749 |
381/436 (87%) |
13109.m03412 protein TBC domain containing protein, expressed |
| TAIR PP10 |
AT2G30710.1 |
+3 |
0.0 |
579 |
291/439 (66%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr2:13086147-13088991 REVERSE LENGTH=440 |
