MLOC_6921 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_6921_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_6921_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0466623 | 0.182207 | 0.155222 | 0.122523 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.148449 | 0.0766228 | 0.129135 | 0.0980787 |
INF1 | Young developing inflorescences (5mm) | 0.900862 | 1.03877 | 0.709264 | 0.690331 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.40638 | 0.992783 | 0.991651 | 1.14139 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.133604 | 0.071574 | 0.109268 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0182604 | 0.00273293 | 0.0540318 | 0.0393237 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.296287 | 0.424209 | 0.301695 | 0.301345 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0632892 | 0.0656934 | 0.0617615 | 0.136406 |
CDS Structure of MLOC_6921
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_6921.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g16370.1 |
-3 |
1e-57 |
205 |
156/296 (53%) |
13106.m01805 protein CCT/B-box zinc finger protein, putative, expressed |
TAIR PP10 |
AT5G15850.1 |
-3 |
4e-24 |
105 |
73/178 (41%) |
| Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:5176297-5177473 REVERSE LENGTH=355 |