MLOC_6921 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04666230.1822070.1552220.122523
LEAShoots from the seedlings (10 cm shoot stage)0.1484490.07662280.1291350.0980787
INF1Young developing inflorescences (5mm)0.9008621.038770.7092640.690331
INF2Developing inflorescences (1-1.5 cm)1.406380.9927830.9916511.14139
ROORoots from the seedlings (10 cm shoot stage)00.1336040.0715740.109268
NODDeveloping tillers at six leaf stage, 3rd internode0.01826040.002732930.05403180.0393237
CAR5Developing grain, bracts removed (5 DPA)0.2962870.4242090.3016950.301345
CAR15Developing grain, bracts removed (15 DPA)0.06328920.06569340.06176150.136406



CDS Structure of MLOC_6921






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_6921.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_6921.1CUST_15357_PI427708080AvailableAvailablecontig_138334 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g16370.1 -3 1e-57 205 156/296 (53%) 13106.m01805 protein CCT/B-box zinc finger protein, putative, expressed
TAIR PP10 AT5G15850.1 -3 4e-24 105 73/178 (41%) | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:5176297-5177473 REVERSE LENGTH=355