MLOC_69205 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains62.535255.009252.190750.3233
LEAShoots from the seedlings (10 cm shoot stage)86.306166.5012109.7363.5553
INF1Young developing inflorescences (5mm)30.028322.158519.677919.6079
INF2Developing inflorescences (1-1.5 cm)15.275917.584617.32816.8491
ROORoots from the seedlings (10 cm shoot stage)46.044542.005638.313639.552
NODDeveloping tillers at six leaf stage, 3rd internode19.585520.38220.686851.9978
CAR5Developing grain, bracts removed (5 DPA)41.871442.416641.774137.0173
CAR15Developing grain, bracts removed (15 DPA)6.342554.793375.3050712.4143



CDS Structure of MLOC_69205






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_69205.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369165NoneNoneNoneNone
MLOC_69205.1CUST_5733_PI427708080AvailableAvailablecontig_56074 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g33080.1 +1 0.0 782 423/460 (92%) 13112.m03375 protein 2-oxoglutarate/malate translocator, chloroplast precursor, putative, expressed
TAIR PP10 AT5G12860.1 +1 0.0 727 388/460 (84%) | Symbols: DiT1 | dicarboxylate transporter 1 | chr5:4059927-4061919 REVERSE LENGTH=557